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Biotechnology Information ncbi nr protein sequence database
Ncbi Nr Protein Sequence Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Sequencing:

Article Title: Engineering Escherichia coli for polyethylene terephthalate powder biodegradation via recoding of an outer membrane protein
Article Snippet: .. In addition, a comprehensive sequence search in the National Center for Biotechnology Information (NCBI) NR protein sequence database revealed a vast repertoire of 33,247,501 candidates, which was reduced to 436,488 after clustering at 50% sequence identity, potentially encompassing nearly all PETase-like sequences with structural similarity to known PETases. ..

Article Title: Study on the pharmacodynamic material basis of Buthus martensii Karsch in ameliorating chronic atrophic gastritis: Screening and experimental validation of protein-peptide bioactive components based on 4D label-free proteomics.
Article Snippet: Ethnopharmacological relevance: Chronic atrophic gastritis (CAG) is a digestive system disorder characterized by persistent inflammation and damage to the gastric mucosa, marking a critical stage in the inflammationcarcinoma transition.. Buthus martensii Karsch (BmK) has been clinically used to alleviate CAG and impede the progression to carcinoma.. However, the active components and pharmacological mechanisms of BmK remain

Article Title: Metabolic Regulation of Carotenoid-Enriched Golden Rice Line
Article Snippet: .. The proteins were searched using the MASCOT program (Matrix Science, London, England) and identified by NCBI nr protein sequence database (National Center for Biotechnology Information, Bethesda, MD, USA) using a MOWSE algorithm. ..

Article Title: Transcriptome analysis of the pheromone glands in Noorda blitealis reveals a novel AOX group of the superfamily Pyraloidea
Article Snippet: Noorda blitealis (Lepidoptera: Pyraloidea: Crambidae) is a major defoliating pest of Moringa trees.. Focusing on its mating and reproduction, here we sequenced and analyzed the transcriptome of its pheromone glands (PGs) with a combination of Illumina sequencing, bioinformatics and phylogenetics approaches, coupled with a genomebased analysis.. Transcriptome sequencing led to the yields of approximately 162 million clean reads, which were assembled into 60,578 unigenes and 121,692 transcripts, respectively.

Comparison:

Article Title: Study on the pharmacodynamic material basis of Buthus martensii Karsch in ameliorating chronic atrophic gastritis: Screening and experimental validation of protein-peptide bioactive components based on 4D label-free proteomics.
Article Snippet: Ethnopharmacological relevance: Chronic atrophic gastritis (CAG) is a digestive system disorder characterized by persistent inflammation and damage to the gastric mucosa, marking a critical stage in the inflammationcarcinoma transition.. Buthus martensii Karsch (BmK) has been clinically used to alleviate CAG and impede the progression to carcinoma.. However, the active components and pharmacological mechanisms of BmK remain

other:

Article Title: A peptide toxin in ant venom mimics vertebrate EGF-like hormones to cause long-lasting hypersensitivity in mammals.
Article Snippet: We used the mature peptide sequence of Mg1a as a query to search (using blastp) the National Center for Biotechnology Information nonredundant (NCBI nr) protein sequence database for related sequences.



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Biotechnology Information ncbi nr protein sequence database
Ncbi Nr Protein Sequence Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/ncbi+nr+protein+sequence+database/database+ncbi+non+redundant/pmc12860643-138-13-11
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(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant Protein Sequences Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
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Biotechnology Information ncbi non redundant protein sequence database nr
(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant Protein Sequence Database Nr, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/ncbi+nr+protein+sequence+database/database+ncbi+non+redundant/pmc12947448-178-10-8
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ncbi non redundant protein sequence database nr - by Bioz Stars, 2026-09
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Biotechnology Information ncbi non redundant nr protein sequence database
(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant Nr Protein Sequence Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/ncbi+nr+protein+sequence+database/database+ncbi+non+redundant/pm40974540-30-13-11
Average 86 stars, based on 1 article reviews
ncbi non redundant nr protein sequence database - by Bioz Stars, 2026-09
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Biotechnology Information ncbi non redundant protein sequence nr database
(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant Protein Sequence Nr Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Non Redundant Protein Sequence Database (Nr) At The National Center For Biotechnology Information (Ncbi), supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant (Nr) Protein Sequence Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Biotechnology Information ncbi non-redundant protein sequence database (nr)
(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, <t>NCBI</t> ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.
Ncbi Non Redundant Protein Sequence Database (Nr), supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/ncbi+nr+protein+sequence+database/non+redundant++nr++database/pm38296923-82-32-30
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Image Search Results


(A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, NCBI ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.

Journal: bioRxiv

Article Title: An enzyme-level benchmark based on environmental bacterial laccases for predicting contaminant fate in water

doi: 10.64898/2026.01.27.701970

Figure Lengend Snippet: (A) Approximate maximum-likelihood phylogenetic tree of the multicopper oxidase MCO1 from Nitrosomonas sp. and two new laccases experimentally validated in this study from a methane-oxidizing bacterium (mMCO, NCBI ID: HEY7867587.1) and a soil ammonia-oxidizing archaeon (aMCO, HYV56308.1) displayed relative to other uncharacterized homologs in global metagenomic datasets colored by metagenomically-assigned phylum of origin. (B) Biogeographic distribution of MCO1 homologs from samples where location information was recorded in environmental sample metadata. Two samples were from notably contaminated sites: Red triangle = soil site contaminated with 1000 mg Cr (VI) kg - . Red circle = crude-oil contaminated marine sediment site.

Article Snippet: The National Center for Biotechnology Information (NCBI) non-redundant protein sequences database (nr) was queried using BLASTP with the above-listed stringent homology parameters, resulting in 960 unique protein sequences.

Techniques: Environmental Sampling